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03 Contract Award Notice - Successful Supplier(s)

Miscanspeed sequencing procurement

  • First published: 01 September 2022
  • Last modified: 01 September 2022
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To record your interest or obtain additional information or documents please find instructions within the Full Notice Text. (NOTE: Contract Award Notices and Prior Information Notices do not normally require a response)

Contents

Summary

OCID:
ocds-kuma6s-121824
Published by:
Aberystwyth University
Authority ID:
AA1009
Publication date:
01 September 2022
Deadline date:
-
Notice type:
03 Contract Award Notice - Successful Supplier(s)
Has documents:
No
Has SPD:
No
Has Carbon Reduction Plan:
N/A

Abstract

Researchers at IBERS, Aberystwyth University are undertaking a 3 year project to implement genomic selection (GS) in the perennial energy crop Miscanthus. The project is to establish genomic selection in 2 Miscanthus recurrent selection pools (M.sinensis and M.sacchariflorus). We need a rapid, high throughput genomic marker system to enable selections in time to make crosses within the same season in order to generate the subsequent generation. CPV: 33696500.

Full notice text

Contract award notice

Results of the procurement procedure

Section I: Contracting entity

I.1) Name and addresses

Aberystwyth University

c/o Finance Office, Student Welcome Centre, Penglais Campus

Aberystwyth

SY23 3FB

UK

Telephone: +44 1970628716

E-mail: pad47@aber.ac.uk

NUTS: UKL1

Internet address(es)

Main address: http://www.aber.ac.uk

I.4) Type of the contracting authority

Other: University

I.5) Main activity

Education

Section II: Object

II.1) Scope of the procurement

II.1.1) Title

Miscanspeed sequencing procurement

II.1.2) Main CPV code

33696500

 

II.1.3) Type of contract

Supplies

II.1.4) Short description

Researchers at IBERS, Aberystwyth University are undertaking a 3 year project to implement genomic selection (GS) in the perennial energy crop Miscanthus. The project is to establish genomic selection in 2 Miscanthus recurrent selection pools (M.sinensis and M.sacchariflorus). We need a rapid, high throughput genomic marker system to enable selections in time to make crosses within the same season in order to generate the subsequent generation.

II.1.6) Information about lots

This contract is divided into lots: No

II.1.7) Total value of the procurement

Value excluding VAT: 224 325.84  GBP

II.2) Description

II.2.3) Place of performance

NUTS code:

UKL1


Main site or place of performance:

Aberystwyth

II.2.4) Description of the procurement

The projects has 2 phases:

Phase 1. Training Set & parents: 111 diploid M. sinensis, 341 tetraploid M.sacchariflorus

Phase 2: Progeny screening: Approx. 1000 progeny per species, per year. Max. 2000 per year, 6000 total over 3 years.

Phase 1.

Leaf samples will be taken from mature plants in July 2022.

A.Genomic DNA will be extracted from leaf samples. We will prepare DNA in-house if necessary, but we would prefer all processing to be done by the company if at all possible.

B.The company will process and sequence the DNA samples

C.The company will generate genomic (SNP) markers (genotype calls rather than NGS sequence tags that then have to be mined for SNPs).

Phase 2:

Samples will be taken from the seedlings in Feb/March of 2023, 2024 and 2025.

A. Genomic DNA will be extracted from leaf samples. We will prepare DNA in-house if necessary, but we would prefer all processing to be done by the company if at all possible.

B. The company will process and sequence the DNA samples. This may be using the same technology or a modified version in relation to Phase 1.

C. The company will generate genomic (SNP) markers (genotype calls rather than NGS sequence tags that then have to be mined for SNPs).

Markers are required back by May/June at the latest. A rapid and robust process is essential or we will miss a year’s crossing and miss our project targets.

We need the same SNPs for both GS training (Phase 1, 2022) and genotyping the seedlings (Phase 2, 2023-2025).

II.2.5) Award criteria

Quality criterion: Technical / Weighting: 800

Cost criterion: Cost / Weighting: 200

II.2.11) Information about options

Options: No

II.2.13) Information about European Union funds

The procurement is related to a project and/or programme financed by European Union funds: No

Section IV: Procedure

IV.1) Description

IV.1.1) Type of procedure

Open procedure

IV.1.8) Information about Government Procurement Agreement (GPA)

The procurement is covered by the Government Procurement Agreement: Yes

IV.2) Administrative information

IV.2.1) Previous publication concerning this procedure

Notice number in the OJ S:

2022/S 022-121824

Section V: Award of contract

A contract/lot is awarded: Yes

V.2 Award of contract

V.2.1) Date of conclusion of the contract

16/08/2022

V.2.2) Information about tenders

Number of tenders received: 3

Number of tenders received from SMEs: 0

Number of tenders received from tenderers from EU Member States: 0

Number of tenders received from tenderers from non-EU Member States: 3

Number of tenders received by electronic means: 3

The contract has been awarded to a group of economic operators: No

V.2.3) Name and address of the contractor

Rapid Genomics

747 SW 2nd Ave, Ste 314

Gainesville

32601

US

Telephone: +1 3522732196

NUTS: US

The contractor is an SME: No

V.2.4) Information on value of the contract/lot (excluding VAT)

Total value of the contract/lot: : 224 325.84  GBP

V.2.5) Information about subcontracting

Section VI: Complementary information

VI.3) Additional information

(WA Ref:124209)

VI.4) Procedures for review

VI.4.1) Review body

High Court

Royal Courts of Justice, The Strand

London

WC2A 2LL

UK

Telephone: +44 2079477501

VI.5) Date of dispatch of this notice

01/09/2022

Coding

Commodity categories

ID Title Parent category
33696500 Laboratory reagents Reagents and contrast media

Delivery locations

ID Description
1014 South West Wales (Carmarthenshire, Pembrokeshire, Ceredigion)

Alert region restrictions

The buyer has restricted the alert for this notice to suppliers based in the following regions.

ID Description
There are no alert restrictions for this notice.

Document family

Notice details
Publication date:
31 May 2022
Deadline date:
01 July 2022 00:00
Notice type:
02 Contract Notice
Authority name:
Aberystwyth University
Publication date:
01 September 2022
Notice type:
03 Contract Award Notice - Successful Supplier(s)
Authority name:
Aberystwyth University

About the buyer

Main contact:
pad47@aber.ac.uk
Admin contact:
N/a
Technical contact:
N/a
Other contact:
N/a

Further information

Date Details
No further information has been uploaded.

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